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Optimize and fix handling of stimulus species assignment

Axel Loewe requested to merge speed-up-stim-assign into master

This MR proposes three changes for bench:

  • Fixing ratio handling (--stim-ratios). So far the iIon was incremented in the loop and the first ratio was assigned to all species as far as I can see
  • Parsing of --stim-species and --stim-ratios only once and not per timestep
  • More explicit documentation of --stim-start

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