Implement regression tests for bidomain simulations with autotester
What does this MR do?
This merge request implements regression tests for the bidomain simulations using autotester.
-
autotester/max_error.py
was modified to be able to take into account different types of output files (.igb, .dat, ...) -
autotester/atc_template_bidomain.py
was modified to run all regression tests previously run bycarptests
for bidomain simulations (moduledevtests.bidomain
). -
autotester/atc_template_limpet.py
was modified so that the paths it generates allow to run the tests from any location. - A relative path in
noground_bidom
test case was changed to an absolute path.
Tests were run in the openCARP pipeline here
Author's checklist
-
Follow the Contribution Guidelines. -
Apply the appropriate labels. -
Does this commit add new dependencies (e.g. Python modules)? If yes, please evaluate carefully if the additional dependency is a more sustainable option than including the functionality in own code. If the former, describe the dependency clearly, add them to the Software Management Plan and the installation instructions (*.md files, CMake files, Docker files etc.).
Reviewer's checklist
All reviewers can help ensure accuracy, clarity, completeness, and adherence to the Contribution Guidelines.
Reviewer
-
Review by a code reviewer or other selected colleague to confirm accuracy, clarity, and completeness. This can be skipped for minor fixes without substantive content changes.
Maintainer
-
Review by assigned maintainer, who can always request/require the above reviews. -
Ensure a release milestone is set.
Edited by Jorge Sanchez