Skip to content
GitLab
Commit 85ccb182 authored by Marie Houillon's avatar Marie Houillon
Browse files

Remove explicit setting of PETSc flavor in regression tests

parent 9791b948
Hide whitespace changes
Inline Side-by-side
regression/devtests/bidomain/lats/run.py
View file @ 85ccb182
......@@ -289,8 +289,7 @@ __tests__ = []
test = testing.Test('thresh', run, ['--measurand', 'Vm',
'--method', 'thresh',
'--event', 'activation',
'--np', '4',
'--flavor', 'petsc'],
'--np', '4'],
tags=[testing.tag.SHORT, testing.tag.PARALLEL])
test.add_filecmp_check('init_acts_activation-thresh.dat', testing.max_error, 0.001)
__tests__.append(test)
......@@ -300,8 +299,7 @@ test = testing.Test('thresh_all_serial', run, ['--measurand', 'Vm',
'--method', 'thresh',
'--event', 'activation',
'--all',
'--np', '1',
'--flavor', 'petsc'],
'--np', '1'],
tags=[testing.tag.MEDIUM, testing.tag.SERIAL])
test.add_filecmp_check('all_lats_0.dat', testing.max_error, 0.001)
test.add_filecmp_check('all_lats_1.dat', testing.max_error, 0.001)
......@@ -312,8 +310,7 @@ test = testing.Test('thresh_all_parallel', run, ['--measurand', 'Vm',
'--method', 'thresh',
'--event', 'activation',
'--all',
'--np', '4',
'--flavor', 'petsc'],
'--np', '4'],
tags=[testing.tag.MEDIUM, testing.tag.PARALLEL])
test.disable_reference_generation()
test.add_filecmp_check('all_lats_0.dat', testing.max_error, 0.001)
......@@ -324,8 +321,7 @@ __tests__.append(test)
test = testing.Test('deriv', run, ['--measurand', 'Vm',
'--method', 'deriv',
'--event', 'activation',
'--np', '4',
'--flavor', 'petsc'],
'--np', '4'],
tags=[testing.tag.SHORT, testing.tag.PARALLEL])
test.add_filecmp_check('init_acts_activation-deriv.dat', testing.max_error, 0.001)
__tests__.append(test)
......
regression/devtests/bidomain/phie_recovery/run.py
View file @ 85ccb182
......@@ -291,7 +291,7 @@ desc = ('')
desc = ('Phie recovery during simulation and as postprocessing step on single core (using FE mass and stiffness '
'matrices)')
test = testing.Test('serial_recv_meth_1', run, ['--np', 1, '--flavor', 'petsc', '--method', 1],
test = testing.Test('serial_recv_meth_1', run, ['--np', 1, '--method', 1],
description = desc,
refdir = 'serial_recv_meth_1',
tags = [testing.tag.FAST,
......@@ -305,7 +305,7 @@ __tests__.append(test)
# -----------------------------------------------------------------------------
desc = ('Phie recovery during simulation and as postprocessing step on multiple cores (using FE mass and '
'stiffness ')
test = testing.Test('parallel_recv_meth_1', run, ['--np', 4, '--flavor', 'petsc', '--method', 1],
test = testing.Test('parallel_recv_meth_1', run, ['--np', 4, '--method', 1],
description = desc,
refdir = 'serial_recv_meth_1',
tags = [testing.tag.FAST,
......
regression/devtests/bidomain/region_vs_gradient_based_heterogeneities/run.py
View file @ 85ccb182
......@@ -362,7 +362,7 @@ simID2 = 'GradientWise_{0:4.2f}-{1:4.2f}'.format(f_min_scf,f_max_scf)
desc = ('Testing region-based and gradient based incorporation of '
'heterogeneities in a thin 2D sheet.')
test = testing.Test('serial', run, ['--np', 1, '--flavor', 'petsc'],
test = testing.Test('serial', run, ['--np', 1],
description = desc,
refdir = 'serial',
tags = [testing.tag.MEDIUM, testing.tag.SERIAL])
......@@ -376,7 +376,7 @@ __tests__.append(test)
desc = ('Same setting as in single core mode above, but now using 8 threads. '
'Compare against single core results.')
test = testing.Test('parallel', run, ['--np', 4, '--flavor', 'petsc'],
test = testing.Test('parallel', run, ['--np', 4],
description = desc,
refdir = 'serial',
tags = [testing.tag.MEDIUM, testing.tag.PARALLEL])
......
regression/devtests/bidomain/stimulation/run.py
View file @ 85ccb182
......@@ -216,7 +216,7 @@ __tests__.append(test)
# test extracellular voltage stimulation with interrupting the circuit (open loop)
test = testing.Test('extra_V_OL', run,
['--stimulus', 'extra_V_OL', '--flavor', 'petsc'],
['--stimulus', 'extra_V_OL'],
tags=[testing.tag.FAST, testing.tag.SERIAL])
test.add_filecmp_check('phie.igb.gz', testing.max_error, 0.001)
test.add_filecmp_check('vm.igb.gz', testing.max_error, 0.001)
......@@ -225,7 +225,7 @@ __tests__.append(test)
# test extracellular current stimulation
test = testing.Test('extra_I', run,
['--stimulus', 'extra_I', '--flavor', 'petsc'],
['--stimulus', 'extra_I'],
tags=[testing.tag.FAST, testing.tag.SERIAL])
test.add_filecmp_check('phie.igb.gz', testing.max_error, 0.001)
test.add_filecmp_check('vm.igb.gz', testing.max_error, 0.001)
......@@ -235,7 +235,7 @@ __tests__.append(test)
# test extracellular current stimulation with two balanced currents,
# ground electrode is in the middle of the strand
test = testing.Test('extra_IbalGnd', run,
['--stimulus', 'extra_I_bal', '--grounded', 'on', '--flavor', 'petsc'],
['--stimulus', 'extra_I_bal', '--grounded', 'on'],
tags=[testing.tag.FAST, testing.tag.SERIAL])
test.add_filecmp_check('phie.igb.gz', testing.max_error, 0.001)
test.add_filecmp_check('vm.igb.gz', testing.max_error, 0.001)
......@@ -245,7 +245,7 @@ __tests__.append(test)
# test extracellular current stimulation with two balanced currents,
# ground electrode is in the middle of the strand
test = testing.Test('extra_IbalNGnd', run,
['--stimulus', 'extra_I_bal', '--grounded', 'off', '--flavor', 'petsc'],
['--stimulus', 'extra_I_bal', '--grounded', 'off'],
tags=[testing.tag.FAST, testing.tag.SERIAL])
test.add_filecmp_check('phie.igb.gz', testing.max_error, 0.001)
test.add_filecmp_check('vm.igb.gz', testing.max_error, 0.001)
......
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment